Package: PvSTATEM 0.0.5
Tymoteusz Kwiecinski
PvSTATEM: Reading, Quality Control and Preprocessing of MBA (Multiplex Bead Assay) Data
Speeds up the process of loading raw data from MBA (Multiplex Bead Assay) examinations, performs quality control checks, and automatically normalises the data, preparing it for more advanced, downstream tasks. The main objective of the package is to create a simple environment for a user, who does not necessarily have experience with R language. The package is developed within the project of the same name - 'PvSTATEM', which is an international project aiming for malaria elimination.
Authors:
PvSTATEM_0.0.5.tar.gz
PvSTATEM_0.0.5.zip(r-4.5)PvSTATEM_0.0.5.zip(r-4.4)PvSTATEM_0.0.5.zip(r-4.3)
PvSTATEM_0.0.5.tgz(r-4.4-any)PvSTATEM_0.0.5.tgz(r-4.3-any)
PvSTATEM_0.0.5.tar.gz(r-4.5-noble)PvSTATEM_0.0.5.tar.gz(r-4.4-noble)
PvSTATEM_0.0.5.tgz(r-4.4-emscripten)PvSTATEM_0.0.5.tgz(r-4.3-emscripten)
|PvSTATEM.html✨
PvSTATEM/json (API)
| # Install 'PvSTATEM' in R: |
| install.packages('PvSTATEM', repos = c('https://mini-pw.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mini-pw/pvstatem/issues
Last updated 5 days agofrom:6ec2a1b5b4. Checks:ERROR: 1 NOTE: 4 OK: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | FAIL | Oct 18 2024 |
| R-4.5-win | NOTE | Oct 18 2024 |
| R-4.5-linux | NOTE | Oct 18 2024 |
| R-4.4-win | NOTE | Oct 18 2024 |
| R-4.4-mac | NOTE | Oct 18 2024 |
| R-4.3-win | OK | Oct 18 2024 |
| R-4.3-mac | OK | Oct 18 2024 |
Exports:create_standard_curve_model_analytegenerate_plate_reportget_nmfiis_valid_data_typeis_valid_sample_typePlateBuilderplot_countsplot_layoutplot_mfi_for_analyteplot_standard_curve_analyteplot_standard_curve_analyte_with_modelprocess_plateread_luminex_datatranslate_sample_names_to_sample_types
Dependencies:bitbit64cellrangerclicliprcolorspacecpp11crayondplyrfansifarvergenericsggplot2ggrepelgluegtablehmsisobandlabelinglatticelifecyclelubridatemagrittrMASSMatrixmgcvmunsellnlmenplrpillarpkgconfigpngprettyunitsprogressR6RColorBrewerRcppreadrreadxlrematchrlangscalesstringistringrtibbletidyselecttimechangetzdbutf8vctrsviridisLitevroomwithr
Our datasets
Rendered fromour_datasets.Rmdusingknitr::rmarkdownon Oct 18 2024.Last update: 2024-10-17
Started: 2024-07-17
Quick introduction to plots created by our package
Rendered fromour_plots.Rmdusingknitr::rmarkdownon Oct 18 2024.Last update: 2024-10-17
Started: 2024-08-27
Basic PvSTATEM functionalities
Rendered fromexample_script.Rmdusingknitr::rmarkdownon Oct 18 2024.Last update: 2024-10-17
Started: 2024-07-08
